DNA Sequencing · Pathology

What is the primary advantage of using targeted gene panels over whole-exome sequencing (WES) in a clinical oncology setting?

  1. Higher sensitivity for detecting structural variants in non-coding regions
  2. Higher depth of coverage at a lower cost
  3. Ability to discover novel genes
  4. Requires less bioinformatic storage
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Correct answer: Higher depth of coverage at a lower cost

Targeted panels focus sequencing power on a specific set of genes, allowing for very high depth of coverage (often >500x) at a lower cost and with faster turnaround time. This high sensitivity is critical for detecting low-frequency somatic mutations in heterogeneous tumor samples.

Difficulty: Medium Question 11 of 20

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